BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB024C07SP1|AL428190
(962 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1682 1882 0.0
>3x_Contig1682
Length = 16889
Score = 1882 bits (948), Expect = 0.0
Identities = 959/962 (99%), Gaps = 1/962 (0%)
Strand = Plus / Minus
Query: 1 gatcaaggtataatgtggtttatccaagtctcactgcaatgaaacctagtgacgttatag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4832 gatcaaggtataatgtggtttatccaagtctcactgcaatgaaacctagtgacgttatag 4773
Query: 61 attattgataatgttagagttctacgtctcctatataatccctttctcccatatttttaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4772 attattgataatgttagagttctacgtctcctatataatccctttctcccatatttttaa 4713
Query: 121 ttcgtgctatagtaaatcgctttattctggggggattgtatcacgtgacaagttggctgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4712 ttcgtgctatagtaaatcgctttattctggggggattgtatcacgtgacaagttggctgt 4653
Query: 181 cgatgttccctctactttgtgacacgacttctcatttccagagtgagatattactaaaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4652 cgatgttccctctactttgtgacacgacttctcatttccagagtgagatattactaaaca 4593
Query: 241 gctttcgctcagcttcaaatcaccagtaattccctcactggaacgctgactcaatgttat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4592 gctttcgctcagcttcaaatcaccagtaattccctcactggaacgctgactcaatgttat 4533
Query: 301 gagatacggatggtctgcatcttctgtacctttttgttacgcattctgtcatttcctgaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4532 gagatacggatggtctgcatcttctgtacctttttgttacgcattctgtcatttcctgaa 4473
Query: 361 acttgattggtcgaaatttcgacgttttgacgttattttgtaaattttagtgatagatca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4472 acttgattggtcgaaatttcgacgttttgacgttattttgtaaattttagtgatagatca 4413
Query: 421 aattcaacagctgcttgatctgtcgtgcgtcagtttaaatcgaacagtagattaattcaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4412 aattcaacagctgcttgatctgtcgtgcgtcagtttaaatcgaacagtagattaattcaa 4353
Query: 481 agaatgttcaggtcaggcattggagattcaattcaaggcagtgagaatgtggatttggca 540
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 4352 agaatgttcaggtcaggcattggagattcaattcaaggcagtaagaatgtggatttggca 4293
Query: 541 gtctttatactacggctgtttgcttggacagctctagtttttttttatttttacagatga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4292 gtctttatactacggctgtttgcttggacagctctagtttttttttatttttacagatga 4233
Query: 601 tgcaattacatactacttttaccattctaccatggcttcacgtatcacttcatacaccaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4232 tgcaattacatactacttttaccattctaccatggcttcacgtatcacttcatacaccaa 4173
Query: 661 ccagctgacagctgtagatggaataaccttgaacaagtttgcagtcaatcctttgtagta 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4172 ccagctgacagctgtagatggaataaccttgaacaagtttgcagtcaatcctttgtagta 4113
Query: 721 acccttcggtccttctgtcttcccaatggtaatcaatgcatcagagacactcttatatct 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4112 acccttcggtccttctgtcttcccaatggtaatcaatgcatcagagacactcttatatct 4053
Query: 781 gaatcctaattcattacctcccatagctaatacttggaa-cgcctcctgagtdaatcaaa 839
||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 4052 gaatcctaattcattacctcccatagctaatacttggaaccgcctcctgagtaaatcaaa 3993
Query: 840 cggataaactagcgtttgtgctactccaccgcttatagcgcccattgccagtttgtataa 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3992 cggataaactagcgtttgtgctactccaccgcttatagcgcccattgccagtttgtataa 3933
Query: 900 atttgccaaattagggtctgtcactggcataaattctttcaattgttcatatactgcgaa 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3932 atttgccaaattagggtctgtcactggcataaattctttcaattgttcatatactgcgaa 3873
Query: 960 at 961
||
Sbjct: 3872 at 3871
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7233
Number of Sequences: 1807
Number of extensions: 7233
Number of successful extensions: 97
Number of sequences better than 1.0e-20: 1
length of query: 962
length of database: 10,358,551
effective HSP length: 16
effective length of query: 946
effective length of database: 10,329,639
effective search space: 9771838494
effective search space used: 9771838494
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)